Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CDQ89_00285 | P37479 | Positive | 54377 - 54820 | 16421.3 |
| crp/fnr family transcriptional regulator | CDQ89_00290 | P9WMH2 | Negative | 54817 - 55494 | 25029.2 |
| fad-binding oxidoreductase | CDQ89_00295 | Q796Y5 | Negative | 55882 - 57318 | 49005.9 |
| rna polymerase sigma factor sigm | CDQ89_00300 | P9WKL6 | Positive | 57545 - 58180 | 22725.9 |
| sdr family oxidoreductase | CDQ89_00305 | P9WEQ5 | Negative | 58209 - 58949 | 25681.7 |
| hypothetical protein | CDQ89_00310 | Not Available | Negative | 58969 - 59244 | 9844.39 |
| hypothetical protein | CDQ89_00315 | Not Available | Negative | 59327 - 60391 | 38091.2 |
| rnd family transporter | CDQ89_00320 | P9WJV2 | Negative | 60650 - 63571 | 105640.0 |
| hypothetical protein | CDQ89_00325 | P0A5K3 | Negative | 63580 - 64002 | 14949.2 |
| ferric uptake regulation protein | CDQ89_00330 | Not Available | Positive | 64560 - 64772 | 7757.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



