Mycobacterium avium subsp. paratuberculosis JIII-386

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium avium subsp. paratuberculosis JIII-386 is a rod-shaped bacterium that primarily inhabits the gut. It is characterized by a single cell arrangement and possesses flagella, indicating motility. This organism operates optimally at a temperature of 37°C, falling within the mesophilic temperature range, which is conducive to its growth and survival. M. avium subsp. paratuberculosis JIII-386 is known to be free-living and has a diverse range of hosts, including Homo sapiens (humans), Bos taurus (cattle), Bos (bovines), Metazoa (a broad category of multicellular animals), Ovis aries (sheep), Primates, Capra hircus (goats), and Cervidae (deer). This wide host range suggests a significant ecological adaptability. Health impacts associated with this bacterium include systemic infections and chronic intestinal inflammation, particularly noted in the context of Johne's disease, a condition that affects the intestines of ruminants and can lead to severe economic losses in livestock. The chronic nature of the diseases it causes emphasizes its potential role in long-term health issues in affected hosts. The presence of M. avium subsp. paratuberculosis in various animal species and its association with serious health conditions underline the importance of understanding its biology and ecology. This knowledge can aid in the development of management strategies to mitigate its impact on both animal health and human health, as it is noted that the bacterium can also infect humans. The accession number for this strain is CP042454.1, which can be referenced for further genomic information.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium avium
StrainJIII-386

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
Habitatgut
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus, Bos
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium avium subsp. paratuberculosis JIII-386, Complete Genome

Gene Summary

Adenine Count

750759 bp

Thymine Count

752891 bp

Guanine Count

1692430 bp

Cytosine Count

1693027 bp

Genome Length

4889107 bp

Protein-coding Genes

4569 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCDQ89_00185Not AvailablePositive38524 - 387277590.94
hypothetical proteinCDQ89_00190Not AvailableNegative38779 - 3932419965.6
rna polymerase sigma factor sigmCDQ89_00195A0QXJ6Negative39499 - 4063640717.7
hypothetical proteinCDQ89_00200Not AvailablePositive40807 - 410829807.64
hypothetical proteinCDQ89_00205Not AvailableNegative41215 - 413946340.45
csbd family proteinCDQ89_00210Q9RJ87Negative41444 - 416175984.22
rna polymerase sigma factor sigmCDQ89_00215P0ACT4Positive42146 - 4292027554.6
rna polymerase sigma factor sigmCDQ89_00220P9WNZ2Positive43015 - 4396334815.2
nadh-quinone oxidoreductase subunit nuoiCDQ89_00225Q744Z4Positive44164 - 4469119604.5
peptidase a2CDQ89_00230Not AvailableNegative45785 - 459555976.15

Displaying genes 61 – 70 of 4632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Systemic infectionCausesPMC2082073
Chronic intestinal inflammationCausesPMC2082073
Johne's diseaseCausesPMC2082073
Johne's diseaseCausesPMC3943398
Johne's diseaseCausesPMC5276850
Johne’s diseaseCausesPMC7977185
Johne s diseaseCausesPMC7977185

Displaying health effects 1 – 7 of 7 in total