Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 29660 - 29742 | Not Available |
| dinb family protein | CDQ89_00140 | Not Available | Negative | 29839 - 30342 | 18847.3 |
| acyl carrier protein | CDQ89_00145 | P63453 | Positive | 30554 - 30817 | 9471.22 |
| long-chain-fatty acid--acp ligase mbtm | CDQ89_00150 | P0A4X9 | Positive | 30814 - 32370 | 54265.9 |
| tnt domain-containing protein | CDQ89_00155 | P9WLK6 | Positive | 32525 - 34423 | 66597.7 |
| hypothetical protein | CDQ89_00160 | Not Available | Positive | 34645 - 34899 | 9216.97 |
| rna polymerase sigma factor sigm | CDQ89_00165 | Not Available | Positive | 35201 - 35479 | 10081.7 |
| is256-like element is1311 family transposase | CDQ89_00170 | P60231 | Negative | 35547 - 36782 | 45017.9 |
| hypothetical protein | CDQ89_00175 | Not Available | Positive | 37096 - 37416 | 11365.7 |
| hypothetical protein | CDQ89_00180 | Not Available | Positive | 37930 - 38481 | 20183.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



