Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_05625 | Not Available | Positive | 1137121 - 1137360 | 8623.11 |
| hypothetical protein | CDQ89_05630 | Not Available | Positive | 1137353 - 1137787 | 15457.3 |
| hypothetical protein | CDQ89_05635 | Not Available | Positive | 1137856 - 1138086 | 7814.32 |
| hypothetical protein | CDQ89_05640 | Not Available | Positive | 1138316 - 1138498 | 6659.96 |
| Putative antirepressor | CDQ89_05645 | P44189 | Negative | 1138477 - 1138785 | 11302.3 |
| hypothetical protein | CDQ89_05650 | Not Available | Negative | 1139152 - 1139670 | 19138.5 |
| Hypothetical protein | CDQ89_05655 | Not Available | Negative | 1139667 - 1139918 | 9499.24 |
| hypothetical protein | CDQ89_05660 | Not Available | Negative | 1139993 - 1140232 | 8937.71 |
| Gp24 | CDQ89_05665 | E7DNB6 | Positive | 1140431 - 1145284 | 164318.0 |
| hypothetical protein | CDQ89_05670 | Not Available | Negative | 1145356 - 1145658 | 11361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



