Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | CDQ89_04635 | Q9CBU1 | Positive | 950199 - 951134 | 32494.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | CDQ89_04640 | Q73VR8 | Positive | 951169 - 952263 | 39259.2 |
| protein disulfide oxidoreductase | CDQ89_04645 | P0A619 | Positive | 952394 - 952897 | 17710.0 |
| rna polymerase sigma factor sigm | CDQ89_04650 | P30344 | Positive | 952899 - 953730 | 27741.3 |
| duf2631 domain-containing protein | CDQ89_04655 | P9WL38 | Negative | 953749 - 954003 | 9658.89 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CDQ89_04660 | Q73VS1 | Positive | 954125 - 955348 | 42303.2 |
| rna polymerase sigma factor sigm | CDQ89_04665 | A1KML4 | Positive | 955368 - 956590 | 43058.4 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CDQ89_04670 | Q73VS3 | Positive | 956623 - 957789 | 40810.0 |
| gnat family n-acetyltransferase | CDQ89_04675 | Not Available | Positive | 957838 - 958692 | 30212.1 |
| penicillin-binding transpeptidase domain-containing protein | CDQ89_04680 | A0R022 | Positive | 958821 - 960638 | 63370.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



