Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | CDQ89_04135 | A0QJC6 | Positive | 852157 - 853158 | 36016.1 |
| nad(p)h:quinone oxidoreductase | CDQ89_04140 | Q9RYU4 | Negative | 853228 - 853827 | 21176.8 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_04145 | P06108 | Negative | 853824 - 855251 | 49368.3 |
| phosphoglycerate dehydrogenase | CDQ89_04150 | P0A545 | Positive | 855281 - 856867 | 54511.2 |
| 3-isopropylmalate dehydrogenase | CDQ89_04155 | Q73VI1 | Positive | 856917 - 857927 | 35662.6 |
| mfs transporter | CDQ89_04160 | P9WJW7 | Negative | 857827 - 859131 | 46097.1 |
| fumarylacetoacetate hydrolase family protein | CDQ89_04165 | I6Y276 | Positive | 859262 - 860068 | 28400.0 |
| glutamate--trna ligase | CDQ89_04170 | Q73VI4 | Positive | 860065 - 861543 | 54022.1 |
| Trna-gln | Not Available | Not Available | Positive | 861695 - 861766 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 861850 - 861922 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



