Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | CDQ89_02485 | P9WMG2 | Negative | 510874 - 511350 | 17585.4 |
| thiolase family protein | CDQ89_02490 | I6XHJ3 | Positive | 511445 - 512620 | 40377.2 |
| duf302 domain-containing protein | CDQ89_02495 | Not Available | Positive | 512625 - 513149 | 18859.7 |
| hypothetical protein | CDQ89_02500 | Not Available | Negative | 513396 - 514538 | 41720.7 |
| tetr/acrr family transcriptional regulator | CDQ89_02505 | Not Available | Positive | 514657 - 515283 | 23111.5 |
| helix-turn-helix transcriptional regulator | CDQ89_02510 | P0ACT0 | Positive | 515321 - 515938 | 21800.1 |
| hypothetical protein | CDQ89_02515 | Not Available | Positive | 515935 - 516759 | 31112.4 |
| fatty acid desaturase | CDQ89_02520 | P9WNZ2 | Negative | 516901 - 518184 | 48766.2 |
| ferredoxin reductase | CDQ89_02525 | P9WNE8 | Negative | 518284 - 519426 | 40934.1 |
| hypothetical protein | CDQ89_02530 | Not Available | Negative | 519548 - 520060 | 17870.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



