Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | CDQ89_22900 | P23823 | Positive | 4828611 - 4829615 | 35310.4 |
| acyl dehydratase | CDQ89_22905 | D1AB77 | Negative | 4829619 - 4830032 | 15752.8 |
| thiolase family protein | CDQ89_22910 | D1AB74 | Negative | 4830038 - 4831246 | 42515.8 |
| rna polymerase sigma factor sigm | CDQ89_22915 | P96855 | Negative | 4831256 - 4833480 | 78675.5 |
| tetr/acrr family transcriptional regulator | CDQ89_22920 | P96676 | Positive | 4833681 - 4834265 | 20652.8 |
| duf1214 domain-containing protein | CDQ89_22925 | Not Available | Positive | 4834343 - 4835440 | 40115.5 |
| sulfotransferase | CDQ89_22930 | P64964 | Positive | 4835437 - 4836609 | 44108.5 |
| duf190 domain-containing protein | CDQ89_22935 | Q9FC38 | Positive | 4836626 - 4837693 | 38396.7 |
| fructose bisphosphate aldolase | CDQ89_22940 | P74309 | Negative | 4837695 - 4838588 | 32187.6 |
| stas domain-containing protein | CDQ89_22945 | P9WGE0 | Positive | 4839036 - 4839413 | 12735.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



