Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione-dependent formaldehyde dehydrogenase | CDQ89_02085 | P47734 | Negative | 425360 - 426541 | 42143.9 |
| gaf and antar domain-containing protein | CDQ89_02090 | Not Available | Negative | 426709 - 427416 | 26451.4 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_02095 | O05267 | Positive | 427749 - 429053 | 46558.3 |
| duf1360 domain-containing protein | CDQ89_02100 | Not Available | Negative | 429066 - 429602 | 18944.8 |
| helix-turn-helix transcriptional regulator | CDQ89_02105 | P40183 | Negative | 429678 - 430040 | 12454.6 |
| hsp20 family protein | CDQ89_02110 | P46729 | Positive | 430192 - 430635 | 16433.7 |
| pas domain-containing protein | CDQ89_02115 | P13733 | Positive | 430761 - 431444 | 25690.2 |
| gaf domain-containing sensor histidine kinase | CDQ89_02120 | P9WGK2 | Negative | 431472 - 433127 | 59482.1 |
| response regulator transcription factor | CDQ89_02125 | P9WMF8 | Negative | 433124 - 433792 | 23798.0 |
| pyridoxamine 5'-phosphate oxidase family protein | CDQ89_02130 | P9WL04 | Positive | 434006 - 434422 | 15529.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



