Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna starvation/stationary phase protection protein | CDQ89_22350 | A0R692 | Negative | 4715887 - 4716435 | 20071.7 |
| dna-3-methyladenine glycosylase 2 family protein | CDQ89_22355 | Not Available | Negative | 4716524 - 4717438 | 32755.6 |
| snoal-like domain-containing protein | CDQ89_22360 | Not Available | Positive | 4717499 - 4717900 | 14898.4 |
| duf427 domain-containing protein | CDQ89_22365 | Not Available | Negative | 4717903 - 4718283 | 13676.8 |
| nad-dependent epimerase/dehydratase family protein | CDQ89_22370 | P73212 | Negative | 4718507 - 4719526 | 36762.3 |
| nuclear transport factor 2 family protein | CDQ89_22375 | Not Available | Negative | 4719523 - 4720029 | 18899.0 |
| peptide-methionine (s)-s-oxide reductase msra | CDQ89_22380 | Q73U14 | Positive | 4720158 - 4720673 | 19317.5 |
| cytochrome p450 | CDQ89_22385 | P63718 | Negative | 4720686 - 4722005 | 49602.6 |
| tetr/acrr family transcriptional regulator | CDQ89_22390 | P32398 | Positive | 4722141 - 4722746 | 21687.3 |
| tobe domain-containing protein | CDQ89_22395 | P45183 | Positive | 4722852 - 4723064 | 7348.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



