Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 9 protein | CDQ89_02035 | Q9R9D5 | Positive | 413337 - 414302 | 33725.7 |
| udp-glucose/gdp-mannose dehydrogenase family protein | CDQ89_02040 | O86422 | Positive | 414299 - 415603 | 45720.8 |
| thiamine pyrophosphate-requiring protein | CDQ89_02045 | P96591 | Positive | 415828 - 417621 | 65006.9 |
| udgx family uracil-dna binding protein | CDQ89_02050 | Q9WYY1 | Negative | 417632 - 418297 | 23893.6 |
| hemerythrin domain-containing protein | CDQ89_02055 | Q8YS92 | Negative | 418362 - 418922 | 20411.2 |
| hypothetical protein | CDQ89_02060 | Not Available | Positive | 419089 - 420135 | 36467.4 |
| duf4190 domain-containing protein | CDQ89_02065 | P65733 | Positive | 420217 - 421218 | 34130.6 |
| aldo/keto reductase | CDQ89_02070 | P9WQA6 | Positive | 421251 - 422225 | 34917.0 |
| sdr family oxidoreductase | CDQ89_02075 | A0A1U8QWA2 | Negative | 422244 - 423023 | 26574.8 |
| glycogen debranching protein glgx | CDQ89_02080 | P0A4Y5 | Negative | 423116 - 425266 | 79622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



