Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase | CDQ89_21750 | P29422 | Negative | 4582668 - 4584122 | 53709.8 |
| catalase | CDQ89_21755 | P29422 | Negative | 4584148 - 4585605 | 54521.0 |
| hypothetical protein | CDQ89_21760 | Not Available | Negative | 4585685 - 4585984 | 11385.5 |
| nad-dependent formate dehydrogenase | CDQ89_21765 | P33160 | Positive | 4586534 - 4587688 | 42288.1 |
| aromatic acid exporter family protein | CDQ89_21770 | P65016 | Negative | 4587704 - 4588681 | 33924.4 |
| voc family protein | CDQ89_21775 | Q9KBZ6 | Negative | 4588858 - 4589226 | 13947.6 |
| pucr family transcriptional regulator | CDQ89_21780 | P9WPH4 | Negative | 4589267 - 4590481 | 43680.5 |
| lysr family transcriptional regulator | CDQ89_21785 | P52686 | Negative | 4590729 - 4591658 | 33569.8 |
| acetolactate synthase large subunit | CDQ89_21790 | P27696 | Negative | 4591698 - 4593344 | 59595.0 |
| nadp-dependent succinic semialdehyde dehydrogenase | CDQ89_21795 | Q73TP5 | Positive | 4593425 - 4594843 | 49982.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



