Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp reductase | CDQ89_21700 | I6Y778 | Positive | 4568720 - 4570084 | 47271.6 |
| dehydratase | CDQ89_21705 | O53664 | Positive | 4570084 - 4570926 | 30389.8 |
| chloride ion channel protein | CDQ89_21710 | B7NUP7 | Negative | 4570928 - 4572181 | 43097.4 |
| tetr/acrr family transcriptional regulator | CDQ89_21715 | P94548 | Negative | 4572207 - 4572854 | 23622.1 |
| rna polymerase sigma factor sigm | CDQ89_21720 | L7N6B0 | Negative | 4572920 - 4574084 | 39865.5 |
| duf2613 domain-containing protein | CDQ89_21725 | Not Available | Positive | 4574203 - 4574403 | 6774.1 |
| duf2613 domain-containing protein | CDQ89_21730 | P9WLB0 | Positive | 4574495 - 4574668 | 5848.16 |
| duf3367 domain-containing protein | CDQ89_21735 | P96419 | Positive | 4574742 - 4578923 | 145266.0 |
| lipase maturation factor family protein | CDQ89_21740 | Q96S06 | Positive | 4579011 - 4580468 | 55057.3 |
| gmc family oxidoreductase | CDQ89_21745 | Q988C9 | Negative | 4580652 - 4582448 | 66483.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



