Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vii secretion protein ecce | CDQ89_21200 | P9WJE4 | Negative | 4439806 - 4440798 | 35566.6 |
| type vii secretion system esx-3 serine protease mycosin mycp3 | CDQ89_21205 | O53695 | Negative | 4440795 - 4442201 | 46368.0 |
| type vii secretion integral membrane protein eccd | CDQ89_21210 | P9WNQ2 | Negative | 4442198 - 4443622 | 47813.3 |
| esx secretion-associated protein espg | CDQ89_21215 | P9WJC6 | Negative | 4443702 - 4444583 | 31594.5 |
| wxg100 family type vii secretion target | CDQ89_21220 | P64094 | Negative | 4444604 - 4444894 | 10432.1 |
| type vii secretion protein esxs | CDQ89_21225 | O53692 | Negative | 4444935 - 4445228 | 9900.52 |
| rna polymerase sigma factor sigm | CDQ89_21230 | P9WI42 | Negative | 4445292 - 4446772 | 49937.0 |
| pe family protein | CDQ89_21235 | L7N695 | Negative | 4446776 - 4447084 | 9578.27 |
| type vii secretion protein eccc | CDQ89_21240 | P9WNA8 | Negative | 4447087 - 4451076 | 145482.0 |
| type vii secretion protein eccb | CDQ89_21245 | P9WNR2 | Negative | 4451073 - 4452692 | 56056.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



