Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rho termination factor | CDQ89_01935 | Not Available | Positive | 394805 - 395062 | 9350.24 |
| nucleotidyltransferase family protein | CDQ89_01940 | Not Available | Negative | 395067 - 395642 | 20855.8 |
| acyl-coa dehydrogenase | CDQ89_01945 | Not Available | Positive | 395957 - 396910 | 33397.6 |
| pig-l family deacetylase | CDQ89_01950 | B8ZRQ3 | Positive | 396907 - 397674 | 26622.0 |
| endonuclease | CDQ89_01955 | Not Available | Positive | 397737 - 398501 | 28286.4 |
| duf3349 domain-containing protein | CDQ89_01960 | Not Available | Negative | 398465 - 398776 | 10733.0 |
| csbd family protein | CDQ89_01965 | Not Available | Negative | 398920 - 399156 | 8138.22 |
| nad(p)h-binding protein | CDQ89_01970 | Not Available | Positive | 399381 - 400217 | 29268.7 |
| hemophore-related protein | CDQ89_01975 | I6X8R5 | Positive | 400450 - 400848 | 13616.1 |
| dna topoisomerase ib | CDQ89_01980 | Q7T6X9 | Positive | 401021 - 402076 | 39467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



