Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloalkane dehalogenase | CDQ89_01635 | Q1QBB9 | Positive | 331963 - 332868 | 33023.2 |
| rna polymerase sigma factor sigm | CDQ89_01640 | P33271 | Positive | 332905 - 334393 | 53271.8 |
| hypothetical protein | CDQ89_01645 | Not Available | Negative | 334329 - 334697 | 13711.1 |
| hypothetical protein | CDQ89_01650 | Not Available | Positive | 334784 - 335131 | 12046.6 |
| atp-dependent dna ligase | CDQ89_01655 | L0TDE1 | Negative | 335098 - 336207 | 41425.2 |
| dna polymerase domain-containing protein | CDQ89_01660 | A0R3R7 | Positive | 336234 - 337262 | 38246.4 |
| hypothetical protein | CDQ89_01665 | Not Available | Positive | 337286 - 337459 | 6344.82 |
| rna polymerase sigma factor sigm | CDQ89_01670 | Not Available | Positive | 337664 - 339676 | 71409.1 |
| is1182 family transposase | CDQ89_01675 | Not Available | Positive | 339742 - 341289 | 56053.6 |
| gmc family oxidoreductase | CDQ89_01680 | P9WMV8 | Negative | 341456 - 343192 | 63229.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



