Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-regulated nucleoid-associated protein lsr2 | CDQ89_17850 | P65649 | Negative | 3778329 - 3778667 | 12138.2 |
| lysine--trna ligase | CDQ89_17855 | P67608 | Negative | 3778811 - 3780310 | 55143.7 |
| type iii pantothenate kinase | CDQ89_17860 | A0QA95 | Negative | 3780357 - 3781172 | 28998.0 |
| aspartate 1-decarboxylase | CDQ89_17865 | A0QA94 | Negative | 3781175 - 3781606 | 15304.3 |
| pantoate--beta-alanine ligase | CDQ89_17870 | Q743Y5 | Negative | 3781606 - 3782532 | 32708.4 |
| duf2520 domain-containing protein | CDQ89_17875 | Not Available | Negative | 3782529 - 3783440 | 31096.4 |
| hypothetical protein | CDQ89_17880 | Not Available | Negative | 3783556 - 3784917 | 49433.7 |
| duf3180 domain-containing protein | CDQ89_17885 | Not Available | Negative | 3785005 - 3785481 | 16829.6 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | CDQ89_17890 | P64144 | Negative | 3785481 - 3786029 | 19417.1 |
| dihydroneopterin aldolase | CDQ89_17895 | P0A581 | Negative | 3786138 - 3786539 | 14232.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



