Mycobacterium avium subsp. paratuberculosis JIII-386

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycobacterium

Description

Mycobacterium avium subsp. paratuberculosis JIII-386 is a rod-shaped bacterium that primarily inhabits the gut. It is characterized by a single cell arrangement and possesses flagella, indicating motility. This organism operates optimally at a temperature of 37°C, falling within the mesophilic temperature range, which is conducive to its growth and survival. M. avium subsp. paratuberculosis JIII-386 is known to be free-living and has a diverse range of hosts, including Homo sapiens (humans), Bos taurus (cattle), Bos (bovines), Metazoa (a broad category of multicellular animals), Ovis aries (sheep), Primates, Capra hircus (goats), and Cervidae (deer). This wide host range suggests a significant ecological adaptability. Health impacts associated with this bacterium include systemic infections and chronic intestinal inflammation, particularly noted in the context of Johne's disease, a condition that affects the intestines of ruminants and can lead to severe economic losses in livestock. The chronic nature of the diseases it causes emphasizes its potential role in long-term health issues in affected hosts. The presence of M. avium subsp. paratuberculosis in various animal species and its association with serious health conditions underline the importance of understanding its biology and ecology. This knowledge can aid in the development of management strategies to mitigate its impact on both animal health and human health, as it is noted that the bacterium can also infect humans. The accession number for this strain is CP042454.1, which can be referenced for further genomic information.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycobacterium
SpeciesMycobacterium avium
StrainJIII-386

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
Habitatgut
Biotic relationshipFree living
Host(s)Homo sapiens, Bos taurus, Bos
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycobacterium avium subsp. paratuberculosis JIII-386, Complete Genome

Gene Summary

Adenine Count

750759 bp

Thymine Count

752891 bp

Guanine Count

1692430 bp

Cytosine Count

1693027 bp

Genome Length

4889107 bp

Protein-coding Genes

4569 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome p450CDQ89_17150P63708Positive3640373 - 364159945756.3
sdr family oxidoreductaseCDQ89_17155A0A1U8QWA2Positive3641600 - 364242729101.9
cytochrome p450CDQ89_17160Q5IZM4Positive3642424 - 364377951412.1
ferredoxinCDQ89_17165P71820Positive3643792 - 36440017895.34
nuclear transport factor 2 family proteinCDQ89_17170Not AvailablePositive3644005 - 364455320793.5
ndma-dependent alcohol dehydrogenaseCDQ89_17175Q7U1B9Positive3644766 - 364589339804.2
snoal-like domain-containing proteinCDQ89_17180Not AvailablePositive3645963 - 364638514962.5
hit family proteinCDQ89_17185P0A5B6Positive3646420 - 364682414819.8
hamp domain-containing histidine kinaseCDQ89_17190O69729Negative3646812 - 364824250678.4
response regulator transcription factorCDQ89_17195O69730Negative3648289 - 364900826464.8

Displaying genes 3431 – 3440 of 4632 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Systemic infectionCausesPMC2082073
Chronic intestinal inflammationCausesPMC2082073
Johne's diseaseCausesPMC2082073
Johne's diseaseCausesPMC3943398
Johne's diseaseCausesPMC5276850
Johne’s diseaseCausesPMC7977185
Johne s diseaseCausesPMC7977185

Displaying health effects 1 – 7 of 7 in total