Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome p450 | CDQ89_17150 | P63708 | Positive | 3640373 - 3641599 | 45756.3 |
| sdr family oxidoreductase | CDQ89_17155 | A0A1U8QWA2 | Positive | 3641600 - 3642427 | 29101.9 |
| cytochrome p450 | CDQ89_17160 | Q5IZM4 | Positive | 3642424 - 3643779 | 51412.1 |
| ferredoxin | CDQ89_17165 | P71820 | Positive | 3643792 - 3644001 | 7895.34 |
| nuclear transport factor 2 family protein | CDQ89_17170 | Not Available | Positive | 3644005 - 3644553 | 20793.5 |
| ndma-dependent alcohol dehydrogenase | CDQ89_17175 | Q7U1B9 | Positive | 3644766 - 3645893 | 39804.2 |
| snoal-like domain-containing protein | CDQ89_17180 | Not Available | Positive | 3645963 - 3646385 | 14962.5 |
| hit family protein | CDQ89_17185 | P0A5B6 | Positive | 3646420 - 3646824 | 14819.8 |
| hamp domain-containing histidine kinase | CDQ89_17190 | O69729 | Negative | 3646812 - 3648242 | 50678.4 |
| response regulator transcription factor | CDQ89_17195 | O69730 | Negative | 3648289 - 3649008 | 26464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



