Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mycofactocin-coupled sdr family oxidoreductase | CDQ89_16550 | A0R518 | Positive | 3528355 - 3529203 | 29972.1 |
| sdr family nad(p)-dependent oxidoreductase | CDQ89_16555 | E3VWK2 | Positive | 3529227 - 3530057 | 29306.8 |
| sdr family oxidoreductase | CDQ89_16560 | P51831 | Negative | 3530104 - 3530913 | 27431.6 |
| coa transferase | CDQ89_16565 | A9WGE3 | Negative | 3530920 - 3533367 | 88102.4 |
| aminopeptidase p family protein | CDQ89_16570 | P54518 | Negative | 3533370 - 3534497 | 39736.2 |
| aminopeptidase p family protein | CDQ89_16575 | P81535 | Negative | 3534487 - 3535740 | 45010.6 |
| amidohydrolase family protein | CDQ89_16580 | Not Available | Negative | 3535740 - 3536912 | 43542.3 |
| cytochrome p450 | CDQ89_16585 | P18327 | Negative | 3536950 - 3538194 | 45696.7 |
| ferredoxin | CDQ89_16590 | P18325 | Negative | 3538217 - 3538411 | 6765.96 |
| helix-turn-helix transcriptional regulator | CDQ89_16595 | Not Available | Negative | 3538424 - 3539101 | 24529.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



