Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase | CDQ89_15950 | Q742K7 | Negative | 3419528 - 3420157 | 23319.4 |
| citrate synthase 2 | CDQ89_15955 | P63778 | Positive | 3420262 - 3421383 | 40306.3 |
| voc family protein | CDQ89_15960 | P64742 | Positive | 3421511 - 3421987 | 16643.8 |
| fad-dependent oxidoreductase | CDQ89_15965 | P65529 | Negative | 3421984 - 3423684 | 59834.6 |
| diiron oxygenase | CDQ89_15970 | P9WKQ5 | Negative | 3423702 - 3424727 | 40167.9 |
| phosphoserine transaminase | CDQ89_15975 | Q742L2 | Positive | 3424974 - 3426092 | 39572.7 |
| duf3071 domain-containing protein | CDQ89_15980 | P9WKQ6 | Positive | 3426215 - 3426979 | 27924.1 |
| duf2537 domain-containing protein | CDQ89_15985 | P9WKQ8 | Negative | 3426976 - 3427257 | 9625.27 |
| rna methyltransferase | CDQ89_15990 | P9WFY2 | Negative | 3427259 - 3428128 | 30590.7 |
| marr family transcriptional regulator | CDQ89_15995 | P9WMF0 | Negative | 3428125 - 3428556 | 15618.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



