Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1049 domain-containing protein | CDQ89_01435 | O69726 | Negative | 293117 - 293467 | 12050.0 |
| abc transporter substrate-binding protein | CDQ89_01440 | P33362 | Positive | 293566 - 294513 | 33267.6 |
| rna polymerase sigma factor sigm | CDQ89_01445 | Q45460 | Positive | 294515 - 295608 | 37996.8 |
| abc transporter permease | CDQ89_01450 | Q8ZPK3 | Positive | 295608 - 296294 | 23862.3 |
| abc transporter permease | CDQ89_01455 | Q45461 | Positive | 296291 - 297007 | 24426.6 |
| putative glycolipid-binding domain-containing protein | CDQ89_01460 | Not Available | Positive | 297008 - 297607 | 22004.8 |
| prephenate dehydrogenase | CDQ89_01465 | O69721 | Negative | 297570 - 298514 | 32531.8 |
| trna adenosine deaminase-associated protein | CDQ89_01470 | O69720 | Positive | 298657 - 299178 | 18441.5 |
| nucleoside deaminase | CDQ89_01475 | P21335 | Positive | 299175 - 299633 | 15860.2 |
| Trna-ser | Not Available | Not Available | Positive | 299663 - 299752 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



