Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_15645 | P9WKN6 | Positive | 3351659 - 3352806 | 40033.9 |
| stas domain-containing protein | CDQ89_15650 | Not Available | Positive | 3353158 - 3353922 | 27103.7 |
| llm class flavin-dependent oxidoreductase | CDQ89_15655 | P9WKP0 | Positive | 3354024 - 3354890 | 32080.6 |
| enoyl-coa hydratase/isomerase family protein | CDQ89_15660 | Q7U004 | Negative | 3354925 - 3355731 | 28803.6 |
| sam-dependent methyltransferase | CDQ89_15665 | Q742F3 | Positive | 3355787 - 3356701 | 32379.0 |
| mbl fold metallo-hydrolase | CDQ89_15670 | I6Y276 | Negative | 3356719 - 3358656 | 68989.7 |
| atp-dependent dna ligase | CDQ89_15675 | P59971 | Negative | 3358653 - 3360947 | 85169.8 |
| mannitol dehydrogenase family protein | CDQ89_15680 | A1CLZ5 | Positive | 3361226 - 3362719 | 55033.5 |
| had family hydrolase | CDQ89_15685 | Not Available | Positive | 3362716 - 3363576 | 29921.4 |
| mannitol dehydrogenase family protein | CDQ89_15690 | A1CLZ5 | Positive | 3363704 - 3365116 | 52267.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



