Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease nucs | CDQ89_15495 | P59979 | Negative | 3318275 - 3318946 | 24950.9 |
| adenylate/guanylate cyclase domain-containing protein | CDQ89_15500 | P9WQ32 | Positive | 3318992 - 3320626 | 58885.0 |
| hypothetical protein | CDQ89_15505 | Not Available | Positive | 3320714 - 3321067 | 9727.3 |
| mfs transporter | CDQ89_15510 | P37498 | Negative | 3321090 - 3322337 | 42212.8 |
| lysr family transcriptional regulator | CDQ89_15515 | P37499 | Positive | 3322419 - 3323303 | 31916.4 |
| dna-3-methyladenine glycosylase 2 family protein | CDQ89_15520 | P9WJW2 | Positive | 3323390 - 3324913 | 54937.8 |
| is110 family transposase | CDQ89_15525 | P14322 | Negative | 3324897 - 3326117 | 44027.1 |
| methylated-dna--[protein]-cysteine s-methyltransferase | CDQ89_15530 | Q9ZET8 | Positive | 3326338 - 3326835 | 17999.4 |
| pyridoxamine 5-phosphate oxidase | CDQ89_15535 | Not Available | Negative | 3326882 - 3327370 | 17604.9 |
| rna polymerase sigma factor sigm | CDQ89_15540 | P06632 | Negative | 3327318 - 3327437 | 4238.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



