Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3618 domain-containing protein | CDQ89_14945 | Not Available | Negative | 3191935 - 3192162 | 8175.0 |
| thioredoxin-dependent thiol peroxidase | CDQ89_14950 | P9WIE0 | Positive | 3192267 - 3192740 | 16992.4 |
| dipeptidase | CDQ89_14955 | B2KZE7 | Negative | 3192741 - 3194162 | 49782.7 |
| holo-acp synthase | CDQ89_14960 | Q73XH8 | Negative | 3194159 - 3194551 | 14196.8 |
| type i polyketide synthase | CDQ89_14965 | A0A0D1DNX1 | Negative | 3194580 - 3203858 | 328004.0 |
| duf1906 domain-containing protein | CDQ89_14970 | I6XEI5 | Negative | 3204421 - 3205143 | 25415.0 |
| merr family transcriptional regulator | CDQ89_14975 | P50330 | Negative | 3205204 - 3206112 | 32712.3 |
| rieske 2fe-2s domain-containing protein | CDQ89_14980 | P0ABR8 | Positive | 3206153 - 3207298 | 42092.7 |
| secreted hydrolase | CDQ89_14985 | Not Available | Negative | 3207287 - 3208639 | 49185.6 |
| aldehyde dehydrogenase | CDQ89_14990 | H1ZV37 | Positive | 3208774 - 3210240 | 52517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



