Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa ester lyase | CDQ89_14845 | P9WPE0 | Negative | 3170271 - 3171092 | 29033.4 |
| maoc family dehydratase | CDQ89_14850 | A9WC34 | Negative | 3171089 - 3171589 | 18268.7 |
| acyl-coa dehydrogenase | CDQ89_14855 | O34421 | Negative | 3171586 - 3172752 | 41305.0 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | CDQ89_14860 | P0A509 | Negative | 3172749 - 3174764 | 71905.3 |
| methylcrotonoyl-coa carboxylase | CDQ89_14865 | I6YDK7 | Negative | 3174770 - 3176371 | 57262.5 |
| tetr/acrr family transcriptional regulator | CDQ89_14870 | P95251 | Positive | 3176554 - 3177210 | 23672.4 |
| hypothetical protein | CDQ89_14875 | P65381 | Positive | 3177274 - 3178035 | 26635.6 |
| mfs transporter | CDQ89_14880 | P42306 | Negative | 3178142 - 3179482 | 46573.6 |
| sdr family oxidoreductase | CDQ89_14885 | P54554 | Positive | 3179552 - 3180358 | 27921.6 |
| duf853 family protein | CDQ89_14890 | P39342 | Negative | 3180362 - 3181927 | 55620.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



