Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 3161717 - 3161790 | Not Available |
| rna polymerase sigma factor sigm | CDQ89_14800 | Not Available | Positive | 3161905 - 3163093 | 41897.0 |
| hypothetical protein | CDQ89_14805 | Not Available | Negative | 3163341 - 3163649 | 11032.0 |
| hypothetical protein | CDQ89_14810 | Not Available | Negative | 3163895 - 3164323 | 15549.7 |
| cutinase family protein | CDQ89_14815 | P63880 | Positive | 3164373 - 3165032 | 21835.9 |
| hypothetical protein | CDQ89_14820 | Not Available | Positive | 3165346 - 3165756 | 15542.3 |
| enoyl-coa hydratase | CDQ89_14825 | P64019 | Positive | 3166000 - 3166770 | 26291.6 |
| 2-oxo acid dehydrogenase subunit e2 | CDQ89_14830 | O06159 | Negative | 3166773 - 3167939 | 41025.4 |
| alpha-ketoacid dehydrogenase subunit beta | CDQ89_14835 | P9WIS0 | Negative | 3167936 - 3168991 | 38223.7 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | CDQ89_14840 | P9WIS2 | Negative | 3168995 - 3170086 | 39727.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



