Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_14695 | Q7TWR6 | Negative | 3135377 - 3135646 | 9177.69 |
| fpg/nei family dna glycosylase | CDQ89_14700 | P64159 | Negative | 3135764 - 3136570 | 29706.6 |
| ribose-5-phosphate isomerase | CDQ89_14705 | Q73XM4 | Negative | 3136589 - 3137068 | 16939.9 |
| dsba family protein | CDQ89_14710 | O53193 | Negative | 3137124 - 3137747 | 23098.1 |
| rna polymerase sigma factor sigm | CDQ89_14715 | Q11010 | Positive | 3137855 - 3140436 | 94892.4 |
| duf5130 domain-containing protein | CDQ89_14720 | P9WLA6 | Negative | 3140433 - 3140900 | 16000.0 |
| hypothetical protein | CDQ89_14725 | Not Available | Negative | 3140887 - 3141117 | 8117.86 |
| hnh endonuclease | CDQ89_14730 | Q6NKI3 | Negative | 3141183 - 3141830 | 23837.9 |
| globin | CDQ89_14735 | Q9CC59 | Positive | 3141974 - 3142363 | 15097.9 |
| rna polymerase sigma factor sigm | CDQ89_14740 | Q9Z3R8 | Positive | 3142411 - 3143977 | 57897.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



