Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | CDQ89_14645 | O53181 | Negative | 3125075 - 3126166 | 39164.2 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | CDQ89_14650 | O53182 | Negative | 3126224 - 3128179 | 68880.0 |
| atp-dependent clp protease atp-binding subunit clpx | CDQ89_14655 | A0QDF5 | Negative | 3128461 - 3129741 | 46905.5 |
| homocysteine s-methyltransferase | CDQ89_14660 | Q47690 | Positive | 3130074 - 3130955 | 30613.1 |
| atp-dependent clp protease proteolytic subunit clpp2 | CDQ89_14665 | Q73XM9 | Negative | 3130977 - 3131612 | 23293.0 |
| atp-dependent clp protease proteolytic subunit | CDQ89_14670 | Q73XM8 | Negative | 3131609 - 3132199 | 21332.5 |
| trigger factor | CDQ89_14675 | A0QDF1 | Negative | 3132329 - 3133723 | 50653.1 |
| Trna-pro | Not Available | Not Available | Positive | 3133792 - 3133868 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3134017 - 3134087 | Not Available |
| beta-lactamase family protein | CDQ89_14690 | Q09621 | Positive | 3134120 - 3135310 | 43343.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



