Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l21 | CDQ89_14595 | A0QDG8 | Negative | 3111585 - 3111896 | 11032.5 |
| ribonuclease e/g | CDQ89_14600 | A0R152 | Negative | 3112108 - 3114948 | 102178.0 |
| nucleoside-diphosphate kinase | CDQ89_14605 | Q73XP1 | Negative | 3115288 - 3115698 | 14757.8 |
| duf4233 domain-containing protein | CDQ89_14610 | Not Available | Negative | 3115739 - 3116116 | 13219.6 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | CDQ89_14615 | I6Y0R5 | Negative | 3116113 - 3117570 | 50801.3 |
| valine--trna ligase | CDQ89_14620 | Q73XN8 | Negative | 3117567 - 3120215 | 98964.9 |
| enoyl-acp reductase | CDQ89_14625 | O53176 | Negative | 3120274 - 3121533 | 44465.6 |
| rna polymerase sigma factor sigm | CDQ89_14630 | O53177 | Negative | 3121603 - 3122054 | 15048.5 |
| is256-like element is1311 family transposase | CDQ89_14635 | P60231 | Positive | 3122515 - 3123750 | 45017.9 |
| rna polymerase sigma factor sigm | CDQ89_14640 | A0QDF8 | Negative | 3124482 - 3125061 | 20816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



