Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | CDQ89_14495 | Not Available | Negative | 3089066 - 3090514 | 52999.8 |
| moxr family atpase | CDQ89_14500 | Q4L6B6 | Negative | 3090525 - 3091400 | 31984.6 |
| glutamate-5-semialdehyde dehydrogenase | CDQ89_14505 | Q73XR2 | Negative | 3091434 - 3092741 | 45527.3 |
| rna polymerase sigma factor sigm | CDQ89_14510 | Not Available | Negative | 3092806 - 3094208 | 49182.9 |
| hamp domain-containing protein | CDQ89_14515 | P0A4Y1 | Negative | 3094208 - 3096403 | 80003.2 |
| ribokinase | CDQ89_14520 | P36945 | Positive | 3096561 - 3097439 | 29361.6 |
| gntr family transcriptional regulator | CDQ89_14525 | P13669 | Negative | 3097436 - 3098248 | 29486.5 |
| mmge/prpd family protein | CDQ89_14530 | Q2TXG0 | Positive | 3098331 - 3099761 | 50098.8 |
| isocitrate lyase/pep mutase family protein | CDQ89_14535 | Q0QLE4 | Positive | 3099774 - 3100661 | 30946.1 |
| homoaconitate hydratase family protein | CDQ89_14540 | Q938C9 | Positive | 3100652 - 3101899 | 44290.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



