Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | CDQ89_14445 | P54200 | Positive | 3078550 - 3080286 | 62449.9 |
| rna polymerase sigma factor sigm | CDQ89_14450 | O07802 | Positive | 3080327 - 3080976 | 23545.2 |
| rna polymerase sigma factor sigm | CDQ89_14455 | B2J0A9 | Positive | 3081043 - 3082099 | 37939.6 |
| transport acessory protein mmps | CDQ89_14460 | P0A5K1 | Positive | 3082279 - 3082707 | 15178.0 |
| mmpl family transporter | CDQ89_14465 | P9WJV2 | Positive | 3082704 - 3085610 | 105687.0 |
| degv family protein | CDQ89_14470 | P9WP04 | Negative | 3085620 - 3086453 | 27868.4 |
| sgnh/gdsl hydrolase family protein | CDQ89_14475 | P71725 | Negative | 3086462 - 3087211 | 27410.9 |
| histidine phosphatase family protein | CDQ89_14480 | P9WIC6 | Negative | 3087201 - 3087875 | 24289.8 |
| ribosome silencing factor | CDQ89_14485 | P54457 | Negative | 3087872 - 3088267 | 14413.8 |
| nicotinate-nucleotide adenylyltransferase | CDQ89_14490 | Q73XR5 | Negative | 3088264 - 3088932 | 24727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



