Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase-like protein | CDQ89_01285 | P9WQ66 | Positive | 268191 - 269387 | 41683.9 |
| nad(p)h-quinone oxidoreductase | CDQ89_01290 | Q53FA7 | Negative | 269392 - 270372 | 33503.5 |
| Trna-ser | Not Available | Not Available | Positive | 270401 - 270487 | Not Available |
| hypothetical protein | CDQ89_01300 | P9WL62 | Negative | 270496 - 271614 | 39866.0 |
| hypothetical protein | CDQ89_01305 | Not Available | Negative | 271655 - 271846 | 7287.24 |
| beta-lactamase family protein | CDQ89_01310 | P71778 | Negative | 271875 - 273119 | 45330.4 |
| crotonase/enoyl-coa hydratase family protein | CDQ89_01315 | Q54SS0 | Negative | 273139 - 273963 | 28810.4 |
| tigr03086 family protein | CDQ89_01320 | P9WKS2 | Positive | 273978 - 274574 | 21119.1 |
| duf4334 domain-containing protein | CDQ89_01325 | Not Available | Negative | 274655 - 275116 | 17443.5 |
| histidinol-phosphate transaminase | CDQ89_01330 | P61005 | Negative | 275127 - 276194 | 37916.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



