Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | CDQ89_14395 | P71730 | Negative | 3054499 - 3055476 | 34209.1 |
| comec/rec2 family competence protein | CDQ89_14400 | P39695 | Negative | 3055536 - 3057038 | 51140.3 |
| comea family dna-binding protein | CDQ89_14405 | P39694 | Negative | 3057083 - 3057943 | 29011.7 |
| acyl-coa dehydrogenase | CDQ89_14410 | I6Y3V5 | Positive | 3058122 - 3059282 | 42608.4 |
| acyl-coa dehydrogenase | CDQ89_14415 | P45867 | Positive | 3059290 - 3060396 | 39360.7 |
| ppox class f420-dependent oxidoreductase | CDQ89_14420 | Not Available | Positive | 3060401 - 3060823 | 14878.6 |
| type i polyketide synthase | CDQ89_14425 | B2HIL7 | Negative | 3060837 - 3071876 | 391513.0 |
| acyltransferase | CDQ89_14430 | P9WIK4 | Positive | 3072782 - 3074203 | 51816.8 |
| rnd family transporter | CDQ89_14435 | P65373 | Positive | 3074364 - 3077330 | 105182.0 |
| pe-ppe domain-containing protein | CDQ89_14440 | Q2M5K2 | Positive | 3077371 - 3078501 | 39172.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



