Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 15 protein | CDQ89_14345 | P71741 | Positive | 3043076 - 3045115 | 76732.6 |
| sensor domain-containing protein | CDQ89_14350 | Not Available | Negative | 3045128 - 3045886 | 26223.4 |
| elongation factor 4 | CDQ89_14355 | P60791 | Negative | 3045901 - 3047808 | 70149.2 |
| type ii toxin-antitoxin system pemk/mazf family toxin | CDQ89_14360 | Not Available | Positive | 3047860 - 3048462 | 22403.7 |
| cbs domain-containing protein | CDQ89_14365 | Q9LEV3 | Negative | 3048491 - 3048919 | 15341.8 |
| rna polymerase sigma factor sigm | CDQ89_14370 | Q73XT9 | Positive | 3049047 - 3049885 | 29843.2 |
| transglutaminase family protein | CDQ89_14375 | Q49757 | Negative | 3049901 - 3051430 | 54542.3 |
| alpha-e domain-containing protein | CDQ89_14380 | P9WL96 | Negative | 3051430 - 3052407 | 36304.1 |
| circularly permuted type 2 atp-grasp protein | CDQ89_14385 | P9WLA8 | Negative | 3052407 - 3054083 | 61455.8 |
| 30s ribosomal protein s20 | CDQ89_14390 | A0QDK7 | Positive | 3054228 - 3054488 | 9479.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



