Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| salicylate synthase | CDQ89_14295 | Q73XV3 | Negative | 3031488 - 3032840 | 48637.8 |
| sodium-dependent bicarbonate transport family permease | CDQ89_14300 | Not Available | Positive | 3033331 - 3034572 | 44908.3 |
| rna polymerase sigma factor sigm | CDQ89_14305 | P9WP72 | Negative | 3034585 - 3035758 | 42114.4 |
| rna polymerase sigma factor sigm | CDQ89_14310 | Q73XV0 | Positive | 3036098 - 3037764 | 59977.1 |
| phosphoadenylyl-sulfate reductase | CDQ89_14315 | P65669 | Positive | 3037761 - 3038504 | 26782.7 |
| sulfate abc transporter atp-binding protein | CDQ89_14320 | Q73XU8 | Negative | 3038551 - 3039639 | 38819.3 |
| sulfate abc transporter permease subunit cysw | CDQ89_14325 | P27370 | Negative | 3039654 - 3040472 | 29450.7 |
| sulfate abc transporter permease subunit cyst | CDQ89_14330 | P16701 | Negative | 3040469 - 3041341 | 30086.2 |
| sulfate abc transporter substrate-binding protein | CDQ89_14335 | P27366 | Negative | 3041338 - 3042369 | 36120.7 |
| hypothetical protein | CDQ89_14340 | Q49760 | Negative | 3042720 - 3042914 | 6820.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



