Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_14245 | Not Available | Negative | 3022228 - 3022446 | 7583.46 |
| hypothetical protein | CDQ89_14250 | Not Available | Positive | 3022530 - 3023009 | 17049.9 |
| alpha/beta hydrolase | CDQ89_14255 | O53424 | Positive | 3023287 - 3024291 | 36468.0 |
| sdr family nad(p)-dependent oxidoreductase | CDQ89_14260 | P66778 | Positive | 3024293 - 3025141 | 29182.0 |
| rna polymerase sigma factor sigm | CDQ89_14265 | Not Available | Positive | 3025166 - 3026085 | 32405.2 |
| nad(p)/fad-dependent oxidoreductase | CDQ89_14270 | Q9RKB5 | Positive | 3026082 - 3027584 | 55617.2 |
| merr family transcriptional regulator | CDQ89_14275 | P45277 | Positive | 3027599 - 3028525 | 34378.4 |
| rna polymerase sigma factor sigm | CDQ89_14280 | P9WNZ6 | Negative | 3028859 - 3029389 | 20180.4 |
| is110 family transposase | CDQ89_14285 | P14322 | Negative | 3029404 - 3030624 | 44027.1 |
| rna polymerase sigma factor sigm | CDQ89_14290 | P9WNZ6 | Negative | 3030839 - 3031327 | 18764.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



