Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | CDQ89_14195 | Q12BV1 | Negative | 3007992 - 3009221 | 46191.7 |
| rna polymerase sigma factor sigm | CDQ89_14200 | H1ZV37 | Negative | 3009218 - 3010684 | 51118.1 |
| cyclohexanecarboxylate-coa ligase | CDQ89_14205 | P38135 | Negative | 3010789 - 3012324 | 55284.0 |
| mce family protein | CDQ89_14210 | I6Y3P1 | Positive | 3012599 - 3013855 | 44211.3 |
| mce family protein | CDQ89_14215 | Not Available | Positive | 3013852 - 3014877 | 36656.1 |
| mce family protein | CDQ89_14220 | Not Available | Positive | 3014877 - 3015941 | 37724.2 |
| mce family protein | CDQ89_14225 | Not Available | Positive | 3015938 - 3017272 | 47139.3 |
| mce family protein | CDQ89_14230 | I6Y3P1 | Positive | 3017269 - 3018474 | 42471.1 |
| mce family protein | CDQ89_14235 | Not Available | Positive | 3018474 - 3020054 | 55806.5 |
| hypothetical protein | CDQ89_14240 | Not Available | Positive | 3020480 - 3021826 | 49263.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



