Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| topology modulation protein | CDQ89_14095 | Not Available | Negative | 2990042 - 2990389 | 13402.2 |
| type 1 glutamine amidotransferase domain-containing protein | CDQ89_14100 | O43084 | Positive | 2990709 - 2991395 | 25373.1 |
| tetr/acrr family transcriptional regulator | CDQ89_14105 | A0R666 | Negative | 2992006 - 2992599 | 21490.9 |
| rna polymerase sigma factor sigm | CDQ89_14110 | Q8A945 | Negative | 2992596 - 2993446 | 29858.4 |
| tetr/acrr family transcriptional regulator | CDQ89_14115 | O34970 | Negative | 2993778 - 2994488 | 25808.7 |
| rna polymerase sigma factor sigm | CDQ89_14120 | Not Available | Negative | 2994524 - 2995077 | 20942.5 |
| hypothetical protein | CDQ89_14125 | Not Available | Negative | 2996082 - 2996579 | 17424.2 |
| cytochrome p450 | CDQ89_14130 | P33271 | Negative | 2996602 - 2997870 | 47201.9 |
| tetr/acrr family transcriptional regulator | CDQ89_14135 | Not Available | Negative | 2997895 - 2998500 | 22850.3 |
| thiolase family protein | CDQ89_14140 | I6Y3T7 | Negative | 2998617 - 2999819 | 42737.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



