Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_14045 | Q83WF4 | Negative | 2982184 - 2982375 | 6906.1 |
| ggdef domain-containing protein | CDQ89_14050 | P36892 | Negative | 2982711 - 2983790 | 38003.3 |
| helix-turn-helix transcriptional regulator | CDQ89_14055 | P40183 | Negative | 2984071 - 2984445 | 13725.2 |
| hypothetical protein | CDQ89_14060 | Not Available | Negative | 2984642 - 2984833 | 6763.0 |
| hypothetical protein | CDQ89_14065 | Not Available | Negative | 2985033 - 2985386 | 12249.8 |
| hsp20 family protein | CDQ89_14070 | P46732 | Negative | 2985423 - 2985839 | 15515.4 |
| rna polymerase sigma factor sigm | CDQ89_14075 | P71073 | Positive | 2986068 - 2987587 | 53432.7 |
| hypothetical protein | CDQ89_14080 | P9WLS8 | Positive | 2987740 - 2988372 | 22698.9 |
| transcription elongation factor grea | CDQ89_14085 | A4F866 | Positive | 2988751 - 2989284 | 19177.7 |
| transcription elongation factor greab | CDQ89_14090 | A4F866 | Positive | 2989281 - 2989748 | 16730.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



