Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_13995 | Q73XY1 | Negative | 2964815 - 2968313 | 126307.0 |
| rna polymerase sigma factor sigm | CDQ89_14000 | Not Available | Positive | 2968420 - 2970061 | 59682.2 |
| 3-deoxy-7-phosphoheptulonate synthase | CDQ89_14005 | P35170 | Negative | 2970156 - 2971217 | 37137.6 |
| ppe domain-containing protein | CDQ89_14010 | P9WI08 | Negative | 2971632 - 2972969 | 44234.6 |
| hypothetical protein | CDQ89_14015 | P9WIK4 | Positive | 2974023 - 2975414 | 51472.5 |
| abc transporter permease | CDQ89_14020 | P9WG20 | Positive | 2975448 - 2977094 | 57125.1 |
| hypothetical protein | CDQ89_14025 | Not Available | Positive | 2977094 - 2978437 | 48060.5 |
| hypothetical protein | CDQ89_14030 | P9WLX0 | Positive | 2978437 - 2979693 | 44254.1 |
| hypothetical protein | CDQ89_14035 | Not Available | Positive | 2979868 - 2980197 | 11374.5 |
| ppe family protein | CDQ89_14040 | P9WI04 | Positive | 2980446 - 2981777 | 42366.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



