Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | CDQ89_13945 | L0TCG5 | Positive | 2944998 - 2945888 | 31471.6 |
| rna polymerase sigma factor sigm | CDQ89_13950 | Not Available | Negative | 2945882 - 2946399 | 19332.5 |
| hypothetical protein | CDQ89_13955 | P9WIN6 | Negative | 2946693 - 2947229 | 18279.7 |
| mbth family protein | CDQ89_13960 | P59965 | Negative | 2947405 - 2947620 | 7897.07 |
| nadph-dependent l-lysine n(6)-monooxygenase mbtg | CDQ89_13965 | Q73XY8 | Negative | 2947601 - 2948887 | 46420.0 |
| rna polymerase sigma factor sigm | CDQ89_13970 | Q70LM5 | Negative | 2948884 - 2953327 | 158066.0 |
| rna polymerase sigma factor sigm | CDQ89_13975 | P45745 | Negative | 2953324 - 2959713 | 230454.0 |
| mycobactin polyketide synthase mbtd | CDQ89_13980 | Q03133 | Negative | 2959715 - 2962753 | 107500.0 |
| rna polymerase sigma factor sigm | CDQ89_13985 | Q03131 | Negative | 2962753 - 2964072 | 45110.2 |
| thioesterase | CDQ89_13990 | Q7TYQ4 | Negative | 2964078 - 2964806 | 25486.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



