Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_13895 | Not Available | Negative | 2938000 - 2938209 | 7817.02 |
| hypothetical protein | CDQ89_13900 | Not Available | Negative | 2938206 - 2938649 | 15556.3 |
| hypothetical protein | CDQ89_13905 | Not Available | Negative | 2938649 - 2938882 | 8973.83 |
| rrna maturation rnase ybey | CDQ89_13910 | Q73XZ9 | Negative | 2938998 - 2939531 | 19662.2 |
| phoh family protein | CDQ89_13915 | P0A5S1 | Negative | 2939554 - 2940612 | 37814.8 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | CDQ89_13920 | P67203 | Negative | 2940773 - 2941534 | 26512.7 |
| molecular chaperone dnaj | CDQ89_13925 | Q73XZ6 | Negative | 2941558 - 2942703 | 40149.8 |
| heat-inducible transcriptional repressor hrca | CDQ89_13930 | Q73XZ5 | Negative | 2942761 - 2943792 | 36791.3 |
| type ii toxin-antitoxin system vapb family antitoxin | CDQ89_13935 | Not Available | Positive | 2944008 - 2944322 | 11950.3 |
| carboxymuconolactone decarboxylase family protein | CDQ89_13940 | P76222 | Positive | 2944405 - 2945001 | 21869.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



