Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CDQ89_13845 | Not Available | Positive | 2929668 - 2930105 | 16803.8 |
| hypothetical protein | CDQ89_13850 | Not Available | Positive | 2930080 - 2930322 | 8945.03 |
| hypothetical protein | CDQ89_13855 | Not Available | Negative | 2930558 - 2931349 | 28843.5 |
| hypothetical protein | CDQ89_13860 | Not Available | Negative | 2931350 - 2931724 | 13314.8 |
| restriction endonuclease | CDQ89_13865 | Not Available | Positive | 2931870 - 2932922 | 39251.0 |
| hypothetical protein | CDQ89_13870 | Not Available | Positive | 2933388 - 2933528 | 5204.17 |
| hypothetical protein | CDQ89_13875 | Not Available | Positive | 2933878 - 2934402 | 19844.2 |
| is3 family transposase | CDQ89_13880 | P59800 | Positive | 2934556 - 2935826 | 47210.3 |
| is110 family transposase | CDQ89_13885 | P14322 | Positive | 2936025 - 2937245 | 44027.1 |
| hypothetical protein | CDQ89_13890 | Not Available | Positive | 2937406 - 2937987 | 21019.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



