Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | CDQ89_13795 | P9WKT0 | Positive | 2917246 - 2918055 | 29509.5 |
| rna polymerase sigma factor sigm | CDQ89_13800 | Q9EY88 | Positive | 2918059 - 2919677 | 58444.0 |
| alpha/beta hydrolase | CDQ89_13805 | Q50681 | Positive | 2919677 - 2920948 | 46999.4 |
| hypothetical protein | CDQ89_13810 | P9WLG4 | Positive | 2921120 - 2922001 | 32497.7 |
| wax ester/triacylglycerol synthase family o-acyltransferase | CDQ89_13815 | P9WKC0 | Negative | 2922015 - 2923418 | 51013.6 |
| ppe family protein | CDQ89_13820 | P9WI18 | Negative | 2923571 - 2924533 | 32337.2 |
| duf732 domain-containing protein | CDQ89_13825 | I6YB21 | Negative | 2924626 - 2924979 | 11759.0 |
| ppe family protein | CDQ89_13830 | P9WI02 | Negative | 2925036 - 2926400 | 45922.9 |
| ppe family protein | CDQ89_13835 | P9WI04 | Negative | 2926412 - 2927755 | 43917.0 |
| is256-like element is1311 family transposase | CDQ89_13840 | P60231 | Positive | 2928341 - 2929576 | 45017.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



