Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase | CDQ89_13695 | P43903 | Positive | 2893829 - 2894803 | 33388.4 |
| protoheme ix farnesyltransferase | CDQ89_13700 | Q741B3 | Negative | 2894980 - 2895906 | 33289.8 |
| transketolase | CDQ89_13705 | P59956 | Positive | 2896163 - 2898262 | 75393.5 |
| transaldolase | CDQ89_13710 | Q741B5 | Positive | 2898279 - 2899400 | 40314.4 |
| glucose-6-phosphate dehydrogenase | CDQ89_13715 | P0A585 | Positive | 2899397 - 2900947 | 57660.5 |
| glucose-6-phosphate dehydrogenase assembly protein opca | CDQ89_13720 | Not Available | Positive | 2901080 - 2901991 | 32642.2 |
| 6-phosphogluconolactonase | CDQ89_13725 | P63339 | Positive | 2901988 - 2902743 | 26049.0 |
| atpase | CDQ89_13730 | Not Available | Positive | 2902784 - 2903182 | 14236.1 |
| histone deacetylase family protein | CDQ89_13735 | Q2QWU2 | Positive | 2903201 - 2904130 | 33252.3 |
| aldo/keto reductase | CDQ89_13740 | P80874 | Negative | 2904132 - 2905118 | 35521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



