Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | CDQ89_13645 | P63517 | Negative | 2883193 - 2884440 | 44208.4 |
| fe-s cluster assembly atpase sufc | CDQ89_13650 | P80866 | Negative | 2884443 - 2885225 | 27972.3 |
| fe-s cluster assembly protein sufd | CDQ89_13655 | P9WFP4 | Negative | 2885222 - 2886412 | 42492.9 |
| fe-s cluster assembly protein sufb | CDQ89_13660 | P9WFP6 | Negative | 2886412 - 2887860 | 53307.0 |
| transcriptional regulator | CDQ89_13665 | Not Available | Negative | 2887857 - 2888654 | 27621.7 |
| hypothetical protein | CDQ89_13670 | O53150 | Positive | 2888705 - 2890408 | 59771.6 |
| abc transporter atp-binding protein | CDQ89_13675 | O07016 | Positive | 2890432 - 2891340 | 32507.2 |
| abc transporter permease | CDQ89_13680 | Not Available | Positive | 2891337 - 2892116 | 26882.9 |
| heme a synthase | CDQ89_13685 | Q5L115 | Positive | 2892268 - 2893221 | 33189.6 |
| hypothetical protein | CDQ89_13690 | D2Z030 | Negative | 2893171 - 2893809 | 23497.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



