Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | CDQ89_13595 | Not Available | Negative | 2875513 - 2875710 | 7135.41 |
| abc-f family atp-binding cassette domain-containing protein | CDQ89_13600 | A0A0H2VBH0 | Negative | 2875825 - 2877462 | 58708.7 |
| enoyl-coa hydratase | CDQ89_13605 | Q7U004 | Negative | 2877486 - 2878295 | 28762.9 |
| thioredoxin | CDQ89_13610 | Q9RD25 | Negative | 2878318 - 2878671 | 12727.0 |
| acyl-coa dehydrogenase | CDQ89_13615 | Q3L887 | Positive | 2878813 - 2880642 | 65828.6 |
| hypothetical protein | CDQ89_13620 | Not Available | Negative | 2880746 - 2880946 | 6842.98 |
| hypothetical protein | CDQ89_13625 | Q03490 | Positive | 2880930 - 2881508 | 18876.9 |
| hypothetical protein | CDQ89_13630 | Q03490 | Positive | 2881637 - 2882356 | 23849.4 |
| metal-sulfur cluster assembly factor | CDQ89_13635 | P70949 | Negative | 2882388 - 2882735 | 12426.5 |
| suf system nifu family fe-s cluster assembly protein | CDQ89_13640 | Q9A1G2 | Negative | 2882710 - 2883174 | 16616.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



