Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor sigm | CDQ89_13545 | O07399 | Negative | 2863835 - 2864603 | 28583.1 |
| rna polymerase sigma factor sigm | CDQ89_13550 | Not Available | Positive | 2864744 - 2865582 | 30140.6 |
| vwa domain-containing protein | CDQ89_13555 | Q740Y5 | Negative | 2865684 - 2866691 | 35890.8 |
| duf58 domain-containing protein | CDQ89_13560 | P9WLX4 | Negative | 2866699 - 2867649 | 34612.6 |
| moxr family atpase | CDQ89_13565 | P94474 | Negative | 2867646 - 2868788 | 40732.3 |
| nlpc/p60 family peptidoglycan endopeptidase ripb | CDQ89_13570 | P9WHU4 | Negative | 2868911 - 2869645 | 25416.6 |
| nlpc/p60 family peptidoglycan endopeptidase ripa | CDQ89_13575 | O53168 | Negative | 2869671 - 2871083 | 49605.7 |
| hypothetical protein | CDQ89_13580 | Not Available | Negative | 2871313 - 2871858 | 19021.7 |
| aconitate hydratase | CDQ89_13585 | O08451 | Positive | 2872089 - 2874902 | 101495.0 |
| tetr/acrr family transcriptional regulator | CDQ89_13590 | O53165 | Positive | 2874938 - 2875516 | 21726.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



