Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase family deazaflavin-dependent oxidoreductase | CDQ89_13495 | Not Available | Positive | 2856686 - 2857213 | 19409.6 |
| hypothetical protein | CDQ89_13500 | Not Available | Positive | 2857326 - 2857517 | 6498.56 |
| hypothetical protein | CDQ89_13505 | P9WLL0 | Positive | 2857521 - 2858300 | 28582.9 |
| sensor domain-containing protein | CDQ89_13510 | Not Available | Positive | 2858397 - 2858990 | 21509.1 |
| hypothetical protein | CDQ89_13515 | Not Available | Negative | 2859009 - 2859365 | 12293.4 |
| spfh/band 7/phb domain protein | CDQ89_13520 | P9WPR8 | Negative | 2859384 - 2860517 | 40804.1 |
| nfed family protein | CDQ89_13525 | Not Available | Negative | 2860548 - 2860985 | 15461.2 |
| hypothetical protein | CDQ89_13530 | O07402 | Positive | 2861043 - 2861969 | 31832.4 |
| ferrochelatase | CDQ89_13535 | Q740Y1 | Negative | 2861973 - 2862983 | 36422.3 |
| enoyl-acp reductase fabi | CDQ89_13540 | O07400 | Negative | 2862991 - 2863800 | 28754.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



