Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | gut |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Bos taurus, Bos |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-lactamase family protein | CDQ89_13445 | P71778 | Negative | 2844917 - 2846203 | 45482.9 |
| methylmalonyl co-a mutase-associated gtpase meab | CDQ89_13450 | P9WPZ0 | Negative | 2846267 - 2847247 | 34842.1 |
| methylmalonyl-coa mutase | CDQ89_13455 | P65488 | Negative | 2847330 - 2849582 | 80733.8 |
| methylmalonyl-coa mutase small subunit | CDQ89_13460 | P65486 | Negative | 2849588 - 2851465 | 65539.7 |
| tvp38/tmem64 family protein | CDQ89_13465 | P9WFS2 | Positive | 2851646 - 2852413 | 26953.4 |
| endopeptidase | CDQ89_13470 | P9WLR9 | Positive | 2852475 - 2853464 | 33513.5 |
| rna polymerase sigma factor sigm | CDQ89_13475 | Not Available | Negative | 2853664 - 2853822 | 4003.59 |
| hamp domain-containing histidine kinase | CDQ89_13480 | A0R3I7 | Negative | 2853874 - 2855316 | 51210.8 |
| response regulator transcription factor | CDQ89_13485 | A3Q5L9 | Negative | 2855313 - 2856035 | 26314.9 |
| rna polymerase sigma factor sigm | CDQ89_13490 | Not Available | Positive | 2856344 - 2856678 | 12006.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Systemic infection | Causes | PMC2082073 |
| Chronic intestinal inflammation | Causes | PMC2082073 |
| Johne's disease | Causes | PMC2082073 |
| Johne's disease | Causes | PMC3943398 |
| Johne's disease | Causes | PMC5276850 |
| Johne’s disease | Causes | PMC7977185 |
| Johne s disease | Causes | PMC7977185 |



